Agentic antimicrobial resistance surveillance with AWS HealthOmics and Amazon Bedrock AgentCore
Processing public bacterial sequencing data for antimicrobial resistance surveillance typically requires specialized bioinformatics and SQL skills. To streamline this process, the team built a reference architecture using AWS HealthOmics, Amazon S3 Tables, and an Amazon Bedrock AgentCore conversational agent that ingests raw reads, normalizes findings, and answers plain-language questions with cited evidence. The resulting system automates the path from public accession numbers to natural-language epidemiological answers.
DEPTH ■■■■■10 min read13 days ago















